Antigen

Antigen Class

TFs and others

Antigen

GATA3

Cell type

Cell type Class

Blood

Cell type

Th1 Cells

MeSH Description

A subset of helper-inducer T-lymphocytes which synthesize and secrete INTERLEUKIN-2; INTERFERON-GAMMA; and INTERLEUKIN-12. Due to their ability to kill antigen-presenting cells and their lymphokine-mediated effector activity, Th1 cells are associated with vigorous delayed-type hypersensitivity reactions.

Sample

source_name

Th1 cells

chip antibody

GATA-3; Antibody vendor: Santa Cruz; Antibody catalog number:sc-22206; Antibody lot number: F1306

cell type

Th1

cell number

100000000

Sequenced DNA Library

library_name

GSM776558: Th1_GATA3

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

22427785

Reads aligned (%)

83.8

Duplicates removed (%)

26.5

Number of peaks

14162 (qval < 1E-05)

hg19

Number of total reads

22427785

Reads aligned (%)

83.1

Duplicates removed (%)

27.8

Number of peaks

14238 (qval < 1E-05)